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1.
Phys Rev Lett ; 127(7): 077202, 2021 Aug 13.
Artigo em Inglês | MEDLINE | ID: mdl-34459640

RESUMO

We investigate the role of domain walls in the ultrafast magnon dynamics of an antiferromagnetic NiO single crystal in a pump-probe experiment with variable pump photon energy. Analyzing the amplitude of the energy-dependent photoinduced ultrafast spin dynamics, we detect a yet unreported coupling between the material's characteristic terahertz- and gigahertz-magnon modes. We explain this unexpected coupling between two orthogonal eigenstates of the corresponding Hamiltonian by modeling the magnetoelastic interaction between spins in different domains. We find that such interaction, in the nonlinear regime, couples the two different magnon modes via the domain walls and it can be optically exploited via the exciton-magnon resonance.

2.
Sci Adv ; 7(11)2021 03.
Artigo em Inglês | MEDLINE | ID: mdl-33692110

RESUMO

Nations' food consumption patterns are increasingly globalized and trade dependent. Natural resources used for agriculture (e.g., water, pollinators) are hence being virtually exchanged across countries. Inspired by the virtual water concept, we, herein, propose the concept of virtual biotic pollination flow as an indicator of countries' mutual dependence on biodiversity-based ecosystem services and provide an online tool to visualize trade flow. Using information on 55 pollinator-dependent crop markets (2001-2015), we show that countries with higher development level demand high levels of biodiversity-based services to sustain their consumption patterns. Such patterns are supported by importation of virtual biotic pollination (up to 40% of national imports of pollinator-dependent crops) from developing countries, stimulating cropland expansion. Quantifying virtual pollination flow can help develop new global socioeconomic policies to meet the interconnected challenges of biodiversity loss, ecosystem health, and social justice.

3.
Rev Sci Instrum ; 91(11): 113001, 2020 Nov 01.
Artigo em Inglês | MEDLINE | ID: mdl-33261465

RESUMO

We developed a table-top setup to perform magneto-optical pump-probe measurements with the possibility to independently tune the photon-energy of both pump and probe beams in the 0.5 eV-3.5 eV range. Our apparatus relies on a commercial turn-key amplified laser system, able to generate light pulses with duration shorter than or comparable to 100 fs throughout the whole spectral range. The repetition rate of the source can be modified via the computer in the 1 kHz to 1 MHz range. A commercial balanced detector is connected to a high-frequency digitizer, allowing for a highly-sensitive detection scheme: rotations of the probe polarization as small as 70 µdeg can be measured. Additionally, a DC magnetic field as high as 9 T and voltages in the kV regime can be applied on the sample. A cryostat allows us to precisely set the temperature of the specimen in the 4 K-420 K interval. We prove the performance of our setup by measuring the ultrafast demagnetization of a cobalt crystal as a function of a wide variety of experimental parameters.

5.
Artigo em Inglês | MEDLINE | ID: mdl-25871173

RESUMO

We investigate the dynamics of a kink in a damped parametrically driven nonlinear Klein-Gordon equation. We show by using a method of averaging that, in the high-frequency limit, the kink moves in an effective potential and is driven by an effective constant force. We demonstrate that the shape of the solitary wave can be controlled via the frequency and the eccentricity of the modulation. This is in accordance with the experimental results reported in a recent paper [Casic et al., Phys. Rev. Lett. 110, 168302 (2013)], where the dynamic self-assembly and propulsion of a ribbon formed from paramagnetic colloids in a time-dependent magnetic field has been studied.

6.
Water Sci Technol ; 70(9): 1503-9, 2014.
Artigo em Inglês | MEDLINE | ID: mdl-25401314

RESUMO

A study has been conducted on a retention soil filter (RSF) to test its effectiveness in removing pharmaceutical residues and microorganisms from combined sewer overflows (CSOs). Efficient removal of solids, nutrients and heavy metals has already been proven. The possibility that organic micropollutants and microorganisms are also retained by the use of RSFs has been identified, but data are lacking. Results obtained in this study, in which testing for removal by a RSF of numerous micro-pollutant substances was performed, are most promising. The pharmaceuticals diclofenac and ibuprofen are presented in detail as examples of such micropollutants. Both showed a reduction in positive samples of more than 55% as well as a significant reduction in median and maximum concentrations. For microorganisms such as Escherichia coli, coliphages and Giardia lamblia (cysts), an average reduction in concentrations by three logarithmic steps (99.9%) was achieved. These results add to the evidence that using a RSF in the advanced treatment of wastewater from CSOs reduces the exposure of water-courses to pharmaceutical residues and microbial contamination.


Assuntos
Filtração , Preparações Farmacêuticas/análise , Microbiologia do Solo , Solo/parasitologia , Eliminação de Resíduos Líquidos , Águas Residuárias , Poluentes Químicos da Água/análise , Colífagos/isolamento & purificação , Escherichia coli/isolamento & purificação , Alemanha , Giardia lamblia/isolamento & purificação , Águas Residuárias/análise , Águas Residuárias/microbiologia , Águas Residuárias/parasitologia
7.
Artigo em Inglês | MEDLINE | ID: mdl-25375576

RESUMO

A method of averaging is applied to study the dynamics of a kink in the damped double sine-Gordon equation driven by both external (nonparametric) and parametric periodic forces at high frequencies. This theoretical approach leads to the study of a double sine-Gordon equation with an effective potential and an effective additive force. Direct numerical simulations show how the appearance of two connected π kinks and of an individual π kink can be controlled via the frequency. An anomalous negative mobility phenomenon is also predicted by theory and confirmed by simulations of the original equation.

8.
Rev. chil. obstet. ginecol ; 79(5): 408-419, oct. 2014. ilus, graf, tab
Artigo em Espanhol | LILACS | ID: lil-729404

RESUMO

Antecedentes: Los lípidos plasmáticos maternos durante el embarazo pueden influir en el crecimiento fetal, particularmente en pacientes con diabetes gestacional; estos lípidos cambian su concentración plasmática materna a lo largo de la gestación. Objetivo: Calcular tablas y curvas de lípidos normales según edad gestacional en una población de embarazadas chilenas. Método: Se midió el colesterol total (CT), colesterol LDL (LDL-C) triglicéridos (TG), Colesterol-HDL (HDL-C), y ácidos grasos no esterificados (NEFA), en 94 embarazadas sanas y jóvenes (<33 años, edad media de 27,6 +/- 6,2 años), con peso pregestacional normal (Índice de Masa Corporal entre 20 y 24,9 Kg/m2 y medio de 23,3 +/- 2,0 Kg/m2). Las pacientes provenían de: Hospital Parroquial de San Bernardo, Santiago (n=55), Hospital de Talca (n=2); Hospital del Profesor, Santiago (n=18); Hospital Regional de Concepción (n=9) y Hospital Clínico de la Pontificia Universidad Católica de Chile (n=10). Resultados: Calculamos, para cada uno de los cuatro lípidos, las curvas de percentil 50, percentil 90 y percentil 10, en mg/dL y mmol/l. Los NEFA solo fueron expresados en mmol/l. Incluimos las funciones matemáticas de las curvas de regresión polinomial de los cuatro lípidos con el fin que sean fácilmente reproducibles en otros tamaños. Conclusiones: Calculamos las tablas y curvas de lípidos maternos normales a lo largo del embarazo, que sean aplicables a la población de embarazadas chilenas.


Background: In normal human pregnancy, maternal lipids can modify the rate of fetal growth, particularly in pregnancies with Gestational Diabetes Mellitus (GDM). These lipids change continuously their serum concentration in the mother along the pregnancy. Aim: To calculate tables and curves of normal serum lipids, according to gestational age, in healthy Chilean pregnant women. Methods: We measured total cholesterol (CT), LDL-cholesterol (LDL-C), triglycerides (TG), HDL-Cholesterol (HDL-C), and Non-Esterified Fatty Acids (NEFA) in 94 young and healthy pregnant women (< 33 years, mean age 27.6 +/- 6.2 years), with normal pregestational Body Mass Index (BMI, 20.0-24.9 Kg/m2 , mean value= 23.3 +/- 2.0 Kg/m2). The women of the study were patients of 5 hospitals: Hospital Parroquial de San Bernardo, Santiago (n=55), Hospital de Talca (n=2); Hospital del Profesor, Santiago (n=18); Hospital Regional de Concepción (n=9) and Hospital Clínico de la Pontificia Universidad Católica de Chile (n=10). Results: For each one of the lipids, we calculated curves of 50th, 90th and 10th percentiles, both in mg/dL and mmol/L (the NEFA were expressed only in mmol/L). The mathematical functions of the curves of polynomial regression of all lipids were included in the manuscript, in order to facilitate their reproduction. Conclusions: We calculated tables and curves of normal maternal serum lipids in relation to gestational, in order to make these available for use in the care of Chilean pregnant women.


Assuntos
Humanos , Adulto , Ácidos Graxos não Esterificados/sangue , Colesterol/sangue , Gravidez/sangue , Triglicerídeos/sangue , Chile , HDL-Colesterol/sangue , LDL-Colesterol/sangue
9.
Virchows Arch ; 460(5): 525-34, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22543453

RESUMO

Alpha isoform of smooth muscle actin (SMA) expression has been reported in giant cell tumour of bone (GCTB) and other benign and malignant bone tumours, but the pattern of SMA expression and the precise nature of SMA-expressing cells in these lesions is uncertain. We determined by immunohistochemistry the expression of SMA and other muscle and vascular markers in normal bone, GCTB and a wide range of primary benign and malignant bone tumours. Cultured stromal cells of GCTB, chondroblastoma (CB), and aneurysmal bone cyst (ABC) were also analysed for SMA expression. SMA was only noted in blood vessels in normal bone. SMA was expressed by mononuclear stromal cells (MSC) cultured from GCTB, ABC and CB. SMA was strongly and diffusely expressed by MSC in non-ossifying fibroma, fibrous dysplasia, and "brown tumour" of hyperparathyroidism. SMA expression was also noted in GCTB, ABC, CB, chondromyxoid fibroma, malignant fibrous histiocytoma of bone and osteosarcoma. Little or no SMA was noted in Langerhans cell histiocytosis, simple bone cyst, Ewing's sarcoma, osteoblastoma, osteoid osteoma, enchondroma, osteochondroma, chondrosarcoma, myeloma, lymphoma, chordoma and adamantinoma. Our findings show that there is differential SMA expression in primary bone tumours and that identifying the presence or absence of SMA is useful in the differential diagnosis of these lesions. The nature of SMA-expressing cells in bone tumours is uncertain but they are negative for desmin and caldesmon and could represent either myofibroblasts or perivascular cells, such as pericytes.


Assuntos
Actinas/análise , Actinas/biossíntese , Biomarcadores Tumorais/análise , Neoplasias Ósseas/metabolismo , Neoplasias Ósseas/patologia , Humanos
10.
Antimicrob Agents Chemother ; 54(1): 312-9, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19822705

RESUMO

Chip calorimetry is introduced as a new monitoring tool that provides real-time information about the physiological state of biofilms. Its potential for use for the study of the effects of antibiotics and other biocides was tested. Established Pseudomonas putida biofilms were exposed to substances known to cause toxicity by different mechanisms and to provoke different responses of defense and resistance. The effects of these compounds on heat production rates were monitored and compared with the effects of these compounds on the numbers of CFU and intracellular ATP contents. The real-time monitoring potential of chip calorimetry was successfully demonstrated by using as examples the fast-acting poisons formaldehyde and 2,4-dinitrophenol (DNP). A dosage of antibiotics initially increased the heat production rate. This was discussed as being the effect of energy-dependent resistance mechanisms (e.g., export and/or transformation of the antibiotic). The subsequent reduction in the heat production rate was attributed to the loss of activity and the death of the biofilm bacteria. The shapes of the death curves were in agreement with the assumed variation in the levels of exposure of cells within the multilayer biofilms. The new monitoring tool provides fast, quantitative, and mechanistic insights into the acute and chronic effects of a compound on biofilm activity while requiring only minute quantities of the biocide.


Assuntos
Antibacterianos/farmacologia , Biofilmes/efeitos dos fármacos , Calorimetria/métodos , Testes de Sensibilidade Microbiana/métodos , 2,4-Dinitrofenol/farmacologia , Trifosfato de Adenosina/metabolismo , Calorimetria/instrumentação , Ciprofloxacina/farmacologia , Formaldeído/farmacologia , Canamicina/farmacologia , Testes de Sensibilidade Microbiana/instrumentação , Microcomputadores , Pseudomonas putida/efeitos dos fármacos , Pseudomonas putida/crescimento & desenvolvimento , Tetraciclina/farmacologia
11.
Thorax ; 64(11): 963-7, 2009 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-19720607

RESUMO

BACKGROUND: Chronic obstructive pulmonary disease (COPD) is associated with an increased risk of lung cancer, independently of smoking. However, the relationship between COPD and total cancer mortality is less certain. A study was undertaken to investigate the association between COPD and total cancer mortality and to determine whether the use of statins, which have been associated with cancer risk in other settings, modified this relationship. METHODS: The study included 3371 patients with peripheral arterial disease who underwent vascular surgery between 1990 and 2006; 1310 (39%) had COPD and the rest did not. The primary end point was cancer mortality (lung and extrapulmonary) over a median follow-up of 5 years. RESULTS: COPD was associated with an increased risk of both lung cancer mortality (hazard ratio (HR) 2.06; 95% CI 1.32 to 3.20) and extrapulmonary cancer mortality (HR 1.43; 95% CI 1.06 to 1.94). The excess risk was mostly driven by patients with moderate and severe COPD. There was a trend towards a lower risk of cancer mortality among patients with COPD who used statins compared with patients with COPD who did not use statins (HR 0.57; 95% CI 0.32 to 1.01). Interestingly, the risk of extrapulmonary cancer mortality was lower among statin users with COPD (HR 0.49; 95% CI 0.24 to 0.99). CONCLUSIONS: COPD was associated with increased lung and extrapulmonary cancer mortality in this large cohort of patients with peripheral arterial disease undergoing vascular surgery. The risk of lung cancer mortality increased with progression of COPD. Statins were associated with a reduced risk of extrapulmonary cancer mortality in patients with COPD.


Assuntos
Inibidores de Hidroximetilglutaril-CoA Redutases/uso terapêutico , Neoplasias/mortalidade , Doença Pulmonar Obstrutiva Crônica/mortalidade , Idoso , Causas de Morte , Métodos Epidemiológicos , Feminino , Humanos , Neoplasias Pulmonares/etiologia , Neoplasias Pulmonares/mortalidade , Masculino , Neoplasias/etiologia , Doenças Vasculares Periféricas/complicações , Doenças Vasculares Periféricas/tratamento farmacológico , Doença Pulmonar Obstrutiva Crônica/complicações , Índice de Gravidade de Doença
12.
Cytogenet Genome Res ; 124(2): 121-7, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19420923

RESUMO

Giant cell tumor of bone (GCTB) is characterized cytogenetically by frequent telomeric associations (tas). To explore the mechanisms behind the formation of tas in GCTB and to investigate their karyotypic consequences, the frequencies of tas and clonal aberrations other than tas in 20 GCTBs were compared to telomere length and status, as assessed by quantitative PCR, fluorescence in situ hybridization (FISH), and expression levels of four genes involved in telomere maintenance. Based on the G-banding results, the tumors were divided into two groups, one with a high frequency of tas and one with a low frequency. Clonal aberrations were found to be restricted to the group with a high level of tas, and the same group showed a significantly larger reduction in telomere length in tumor cells compared to peripheral blood cells. Furthermore, 65 out of 66 tas analyzed by FISH were negative for telomeric sequences. The expression levels of TERT, TERF1, TERF2, and POT1 did not correlate with telomere length or the frequency of tas. Thus, the present findings provide strong support for the notion that decreased telomere length is a prerequisite for tas in GCTBs and that the clonal changes occurring in GCTBs are derived from tas.


Assuntos
Aberrações Cromossômicas , Tumor de Células Gigantes do Osso/genética , Telômero/metabolismo , Adolescente , Adulto , Bandeamento Cromossômico , Células Clonais , Feminino , Regulação Neoplásica da Expressão Gênica , Humanos , Hibridização in Situ Fluorescente , Masculino , Pessoa de Meia-Idade , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Complexo Shelterina , Telomerase/genética , Telomerase/metabolismo , Proteínas de Ligação a Telômeros/genética , Proteínas de Ligação a Telômeros/metabolismo , Proteína 2 de Ligação a Repetições Teloméricas/genética , Proteína 2 de Ligação a Repetições Teloméricas/metabolismo
13.
Phys Rev E Stat Nonlin Soft Matter Phys ; 79(3 Pt 2): 036601, 2009 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19392067

RESUMO

We investigate the ratchet dynamics of solitons of a sine-Gordon system with additive inhomogeneities. We show by means of a collective coordinate approach that the soliton moves like a particle in an effective potential which is a result of the inhomogeneities. Different degrees of freedom of the soliton are used as collective coordinates in order to study their influence on the motion of the soliton. The collective coordinates considered are the soliton position, its width and offset, and the height of the spikes that appear on the soliton. The results of the theory are compared with numerical simulations of the full system.

14.
Phys Rev E Stat Nonlin Soft Matter Phys ; 79(1 Pt 2): 016207, 2009 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19257122

RESUMO

We investigate homogeneous and inhomogeneous sine-Gordon ratchet systems in which a temporal symmetry and the spatial symmetry, respectively, are broken. We demonstrate that in the inhomogeneous systems with ac driving the soliton dynamics is chaotic in certain parameter regions, although the soliton motion is unidirectional. This is qualitatively explained by a one-collective-coordinate theory which yields an equation of motion for the soliton that is identical to the equation of motion for a single particle ratchet which is known to exhibit chaotic transport in its underdamped regime. For a quantitative comparison with our simulations we use a two-collective-coordinate (2CC) theory. In contrast to this, homogeneous sine-Gordon ratchets with biharmonic driving, which breaks a temporal shift symmetry, do not exhibit chaos. This is explained by a 2CC theory which yields two ODEs: one is linear, the other one describes a parametrically driven oscillator which does not exhibit chaos. The latter ODE can be solved by a perturbation theory which yields a hierarchy of linear equations that can be solved exactly order by order. The results agree very well with the simulations.

15.
Cytopathology ; 20(5): 304-14, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-18637810

RESUMO

BACKGROUND: Low-grade fibromyxoid sarcoma (LGFMS) is an uncommon neoplasm with bland morphology and an indolent clinical course, although metastases may develop in approximately 5-10% of the cases. The diagnosis of LGFMS can be difficult to render from fine needle aspiration cytology (FNAC) alone because of morphological overlap with other spindle cell and myxoid lesions. OBJECTIVE: To determine cytological criteria for LGFMS by reviewing FNAC aspirates in eight cases and to compare the findings with those in subsequent histological sections. METHODS: FNAC slides were reviewed from eight patients with subsequently excised tumours diagnosed as LGFMS. Of these patients, six also had core needle biopsies (CNB). Cytogenetic and/or molecular analysis was carried on all tumours. RESULTS: The patients were six men and two women ranging in age from 26 to 78 years. Tumours arose in the deep soft tissues of the thigh (n = 5), shoulder girdle (n = 1) or upper arm (n = 1) and one in the subcutaneous tissue of the abdominal wall. Cytological features included clusters of bland spindle and round/polygonal cells embedded in a collagenous and myxoid matrix along with dissociated, uniform or slightly/moderately pleomorphic spindle cells, bare nuclei and fragments of collagen and myxoid tissue in varying proportions. Unequivocal sarcoma was diagnosed in two aspirates, but mitoses were absent in all cases. In three cases, the diagnosis was inconclusive with regard to benignity or malignancy, while three were erroneously diagnosed as benign spindle cell lesions. Although the diagnosis was suggested on three of six CNB, these presented similar diagnostic problems. CONCLUSIONS: There were no cytomorphological findings in FNAC to allow for a clear cut separation of LGFMS from other spindle cell or myxoid lesions, but high-grade sarcoma could be excluded. Surgical (incisional or excisional) biopsy or, alternatively, examination of RT-PCR for the FUS/CREB3L or FUS/CREB3L1 fusion transcripts may be necessary to obtain a correct diagnosis.


Assuntos
Biópsia por Agulha Fina , Fibroma , Sarcoma , Neoplasias de Tecidos Moles , Adulto , Idoso , Citogenética , Feminino , Fibroma/diagnóstico , Fibroma/patologia , Humanos , Imuno-Histoquímica , Masculino , Pessoa de Meia-Idade , Sarcoma/diagnóstico , Sarcoma/patologia , Neoplasias de Tecidos Moles/diagnóstico , Neoplasias de Tecidos Moles/patologia
16.
J Phys Condens Matter ; 21(33): 336005, 2009 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-21828617

RESUMO

Spin dynamics with the Landau-Lifshitz equation has provided topics for a wealth of research endeavors. We introduce here a numerical integration method which explicitly uses the precession motion of a spin about the local field, thus intrinsically conserving spin lengths, and therefore allowing for relatively quick results for a large number of situations with varying temperatures and couplings. This method is applied to the effect of long-range dipole-dipole interactions in two-dimensional clusters of spins with nearest-neighbor XY-Heisenberg exchange interactions on a square lattice at finite temperature. The structures thus obtained are analyzed through orientational correlations functions. Magnon dispersion curves, different from those of the standard Heisenberg model, are obtained and discussed. The number of vortices in the system is discussed as a function of temperature and typical examples of vortex dynamics are shown.

17.
J Bone Joint Surg Br ; 90(7): 929-33, 2008 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-18591605

RESUMO

Deep-seated lipomas are often atypical histologically and are considered by some to have a high risk of recurrence after excision. We reviewed 215 deep-seated lipomas of the extremities and trunk wall with reference to histology, cytogenetics, clinical features and local recurrence. We classified tumours with atypical features and/or ring chromosomes as atypical lipomas. These were more common in men, larger than ordinary lipomas and more often located in the upper leg. The annual incidence was estimated as ten per million inhabitants and the ratio of atypical to ordinary lipomas was 1:3. In total, six tumours (3%), recurred locally after a median of eight years (1 to 16); of these, four were classified as atypical. The low recurrence rate of deep-seated lipomas of the extremity or trunk wall, irrespective of histological subtype, implies that if surgery is indicated, the tumour may be shelled out, that atypical lipomas in these locations do not deserve the designation well-differentiated liposarcoma, and that routine review after surgery is not required.


Assuntos
Extremidades/patologia , Lipoma/patologia , Neoplasias de Tecidos Moles/patologia , Parede Torácica/patologia , Adolescente , Adulto , Distribuição por Idade , Idoso , Idoso de 80 Anos ou mais , Criança , Citogenética/métodos , Feminino , Humanos , Lipoma/genética , Masculino , Pessoa de Meia-Idade , Recidiva Local de Neoplasia , Estadiamento de Neoplasias , Neoplasias de Tecidos Moles/genética , Estatísticas não Paramétricas , Resultado do Tratamento
18.
J Microbiol Methods ; 74(2-3): 74-81, 2008 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-18502524

RESUMO

The partial dissipation of Gibbs energy as heat reflects the metabolic dynamic of biofilms in real time and may also allow quantitative conclusions about the chemical composition of the biofilm via Hess' law. Presently, the potential information content of heat is hardly exploited due to the low flexibility, the low throughput and the high price of conventional calorimeters. In order to overcome the limitations of conventional calorimetry a miniaturized calorimeter for biofilm investigations has been evaluated. Using four thermopiles a heat production with spatial and temporal resolutions of 2.5 cm(-1) and 2 s(-1) could be determined. The limit of detection of the heat flow measurement was 20 nW, which corresponds to the cell density of an early stage biofilm (approx. 3x10(5) cells cm(-2)). By separating biofilm cultivation from the actual heat measurement, a high flexibility and a much higher throughput was achieved if compared with conventional calorimeters. The approach suggested allows cultivation of biofilms in places of interest such as technological settings as well as in nature followed by highly efficient measurements in the laboratory. Functionality of the miniaturized calorimeter was supported by parallel measurements with confocal laser scanning microscopy and a fiber optic based oxygen sensor using the oxycaloric equivalent (-460 kJ mol-O2(-1)).


Assuntos
Biofilmes , Calorimetria/métodos , Pseudomonas putida/fisiologia , Técnicas Biossensoriais , Microscopia Confocal , Oxigênio/análise , Sensibilidade e Especificidade , Fatores de Tempo
19.
J Pathol ; 215(1): 78-86, 2008 May.
Artigo em Inglês | MEDLINE | ID: mdl-18338330

RESUMO

The EWSR1 gene is known to play a crucial role in the development of a number of different bone and soft tissue tumours, notably Ewing's sarcoma. POU5F1 is expressed during early development to maintain the totipotent status of embryonic stem and germ cells. In the present study, we report the fusion of EWSR1 and POU5F1 in two types of epithelial tumours: hidradenoma of the skin and mucoepidermoid carcinoma of the salivary glands. This finding not only broadens considerably the spectrum of neoplasms associated with EWSR1 fusion genes but also strengthens the evidence for shared pathogenetic mechanisms in the development of adnexal and salivary gland tumours. Reminiscent of the previously reported fusion genes involving EWSR1, the identified transcript is predicted to encode a chimeric protein consisting of the EWSR1 amino-terminal domain and the POU5F1 carboxy-terminal domain. We assessed the transcriptional activation potential of the chimera compared to the wild-type proteins, as well as activation of transcription through the oct/sox composite element known to bind POU5F1. Among other POU5F1 target genes, this element is present in the promoter of NANOG and in the distal enhancer of POU5F1 itself. Our results show that although the chimera is capable of significant transcriptional activation, it may in fact convey a negative regulatory effect on target genes.


Assuntos
Adenoma de Glândula Sudorípara/metabolismo , Proteínas de Ligação a Calmodulina/genética , Carcinoma Mucoepidermoide/metabolismo , Fator 3 de Transcrição de Octâmero/genética , Proteínas de Ligação a RNA/genética , Glândulas Salivares/metabolismo , Neoplasias Cutâneas/metabolismo , Adulto , Mapeamento Cromossômico , Cromossomos Humanos Par 22 , Cromossomos Humanos Par 6 , Feminino , Humanos , Hibridização in Situ Fluorescente , Pessoa de Meia-Idade , Proteínas de Fusão Oncogênica/análise , Proteínas de Fusão Oncogênica/genética , Gravidez , Proteína EWS de Ligação a RNA , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Transfecção/métodos , Translocação Genética
20.
Br J Cancer ; 98(2): 434-42, 2008 Jan 29.
Artigo em Inglês | MEDLINE | ID: mdl-18071362

RESUMO

The initiating somatic genetic events in chordoma development have not yet been identified. Most cytogenetically investigated chordomas have displayed near-diploid or moderately hypodiploid karyotypes, with several numerical and structural rearrangements. However, no consistent structural chromosome aberration has been reported. This is the first array-based study characterising DNA copy number changes in chordoma. Array comparative genomic hybridisation (aCGH) identified copy number alterations in all samples and imbalances affecting 5 or more out of the 21 investigated tumours were seen on all chromosomes. In general, deletions were more common than gains and no high-level amplification was found, supporting previous findings of primarily losses of large chromosomal regions as an important mechanism in chordoma development. Although small imbalances were commonly found, the vast majority of these were detected in single cases; no small deletion affecting all tumours could be discerned. However, the CDKN2A and CDKN2B loci in 9p21 were homo- or heterozygously lost in 70% of the tumours, a finding corroborated by fluorescence in situ hybridisation, suggesting that inactivation of these genes constitute an important step in chordoma development.


Assuntos
Cordoma/genética , Aberrações Cromossômicas , Deleção de Genes , Genes p16 , Hibridização de Ácido Nucleico , Análise de Sequência com Séries de Oligonucleotídeos , Neoplasias da Coluna Vertebral/genética , Adulto , Idoso , Idoso de 80 Anos ou mais , Cromossomos Humanos Par 9 , Inibidor de Quinase Dependente de Ciclina p15/genética , Feminino , Dosagem de Genes , Humanos , Hibridização in Situ Fluorescente , Masculino , Pessoa de Meia-Idade , Hibridização de Ácido Nucleico/métodos
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